STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD13DAnkyrin repeat domain 13D. (617 aa)    
Predicted Functional Partners:
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
   0.887
SSH2
Slingshot protein phosphatase 2.
 
   
  0.743
SSH3
Slingshot protein phosphatase 3.
 
   
  0.615
SSH1
Slingshot protein phosphatase 1.
 
   
  0.601
LRRC73
Leucine rich repeat containing 73.
      
 0.569
TEPSIN
TEPSIN adaptor related protein complex 4 accessory protein.
      
 0.568
VSIG10
V-set and immunoglobulin domain containing 10.
      
 0.535
POLR3H
RNA polymerase III subunit H.
      
 0.529
DOCK3
Dedicator of cytokinesis 3.
      
 0.512
ENSACOP00000019001
annotation not available
      
 0.426
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.