STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUBP1Nucleotide binding protein 1. (490 aa)    
Predicted Functional Partners:
NDOR1
NADPH dependent diflavin oxidoreductase 1.
    
 0.874
MMS19
MMS19 homolog, cytosolic iron-sulfur assembly component.
   
 0.866
NARF
Nuclear prelamin A recognition factor.
   
 0.841
CIAO3
Cytosolic iron-sulfur assembly component 3.
   
 0.841
CARNMT1
Carnosine N-methyltransferase 1.
     
 0.836
ALDH7A1
Aldehyde dehydrogenase 7 family member A1.
    
 0.819
ABCB7
ATP binding cassette subfamily B member 7.
    
 0.819
ALDH4A1
Aldehyde dehydrogenase 4 family member A1.
    
 0.819
HAL
Histidine ammonia-lyase.
  
 
  0.814
CIAPIN1
Cytokine induced apoptosis inhibitor 1.
   
 0.814
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.