STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXC4Homeobox C4. (224 aa)    
Predicted Functional Partners:
HOXB5
Homeobox B5.
  
 
0.921
ENSACOP00000013825
annotation not available
   
 
0.920
HOXC6
Homeobox C6.
  
 
0.916
HOXB6
Homeobox B6.
  
 
0.865
HOXD4
Homeobox D4.
  
 
0.773
HOXA7
Homeobox A7.
   
 
0.743
HOXB7
Homeobox B7.
   
 
0.727
PBX3
PBX homeobox 3.
    
 0.718
PBX4
PBX homeobox 4.
    
 0.718
PBX1
PBX homeobox 1.
    
 0.718
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.