STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NCLNNicalin. (563 aa)    
Predicted Functional Partners:
CCDC47
Coiled-coil domain containing 47.
    
 
 0.960
RPL19
Ribosomal protein L19.
    
   0.878
ENSACOP00000013247
annotation not available
   
 
 0.877
ENSACOP00000013274
annotation not available
   
 
 0.877
RPL11
Ribosomal protein L11.
    
 
 0.856
ENSACOP00000005615
annotation not available
    
   0.855
RPL9
Ribosomal protein L9.
    
   0.850
RPL5
Ribosomal protein L5.
    
   0.850
RPL35
Ribosomal protein L35.
    
   0.850
ENSACOP00000003243
annotation not available
    
   0.850
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.