STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKD1Polycystin 1, transient receptor potential channel interacting. (4130 aa)    
Predicted Functional Partners:
PKD2
Polycystin 2, transient receptor potential cation channel.
    
0.998
PKD2L1
Polycystin 2 like 1, transient receptor potential cation channel.
    
0.977
PKD2L2
Polycystin 2 like 2, transient receptor potential cation channel.
    
0.829
MYOT
Myotilin.
    
 0.808
ENSACOP00000012883
annotation not available
    
0.705
CCDC25
Coiled-coil domain containing 25.
    
 0.695
EXOC5
Exocyst complex component 5.
     
 0.661
EXOC4
Exocyst complex component 4.
     
 0.630
ASAP1
ArfGAP with SH3 domain, ankyrin repeat and PH domain 1.
     
 0.622
ASAP2
ArfGAP with SH3 domain, ankyrin repeat and PH domain 2.
     
 0.622
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.