STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACOP00000014981annotation not available (1404 aa)    
Predicted Functional Partners:
APOA1
Apolipoprotein A1.
    
 0.641
ENSACOP00000019589
annotation not available
    
 0.578
ATP5F1C
ATP synthase F1 subunit gamma.
  
   0.565
NR1H3
Nuclear receptor subfamily 1 group H member 3.
    
 0.552
ATP5F1D
ATP synthase F1 subunit delta.
   
   0.551
ENSACOP00000010448
annotation not available
   
 0.546
NR1H4
Nuclear receptor subfamily 1 group H member 4.
    
 0.541
ENSACOP00000004868
annotation not available
    
 
 0.536
ENSACOP00000005643
annotation not available
    
 
 0.536
VDR
Vitamin D receptor.
    
 0.535
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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