STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLCH1Phospholipase C eta 1. (1011 aa)    
Predicted Functional Partners:
PIP5K1B
Phosphatidylinositol-4-phosphate 5-kinase type 1 beta.
   
 0.852
PIP5K1A
Phosphatidylinositol-4-phosphate 5-kinase type 1 alpha.
   
 0.852
IPMK
Inositol polyphosphate multikinase.
    
 0.846
SYNJ1
Synaptojanin 1.
   
  0.828
SYNJ2
Synaptojanin 2.
   
  0.828
INPP5J
Inositol polyphosphate-5-phosphatase J.
     
 0.818
INPP5K
Inositol polyphosphate-5-phosphatase K.
     
 0.818
PTEN
Phosphatase and tensin homolog.
    
 0.814
INPP5B
Inositol polyphosphate-5-phosphatase B.
     
 0.810
INPP5E
Inositol polyphosphate-5-phosphatase E.
     
 0.810
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.