STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRMS1LBRMS1 like transcriptional repressor. (323 aa)    
Predicted Functional Partners:
ARID4A
AT-rich interaction domain 4A.
    
 0.998
ARID4B
AT-rich interaction domain 4B.
    
 0.998
SUDS3
SDS3 homolog, SIN3A corepressor complex component.
    
0.981
SINHCAF
SIN3-HDAC complex associated factor.
    
 0.976
SIN3B
SIN3 transcription regulator family member B.
    
 0.974
SIN3A
SIN3 transcription regulator family member A.
    
 0.974
ENSACOP00000016014
annotation not available
    
 0.970
PHF12
PHD finger protein 12.
    
 0.970
SAP130
Sin3A associated protein 130.
    
 0.960
ING2
Inhibitor of growth family member 2.
   
 0.946
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.