STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACOP00000016059annotation not available (104 aa)    
Predicted Functional Partners:
SMC3
Structural maintenance of chromosomes 3.
   
 0.987
SMC1B
Structural maintenance of chromosomes 1B.
   
 0.986
MAU2
MAU2 sister chromatid cohesion factor.
    
 0.959
RAD21
RAD21 cohesin complex component.
   
 0.958
ENSACOP00000009694
annotation not available
   
 0.958
PDS5A
PDS5 cohesin associated factor A.
   
 0.939
PDS5B
PDS5 cohesin associated factor B.
   
 0.933
ENSACOP00000020592
annotation not available
   
 0.919
SMC4
Structural maintenance of chromosomes 4.
   
 0.903
WAPL
WAPL cohesin release factor.
   
 0.877
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.