STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM102AFamily with sequence similarity 102 member A. (385 aa)    
Predicted Functional Partners:
PI4KB
Phosphatidylinositol 4-kinase beta.
   
 0.860
SACM1L
SAC1 like phosphatidylinositide phosphatase.
    
 0.846
INPP5E
Inositol polyphosphate-5-phosphatase E.
     
 0.820
INPPL1
Inositol polyphosphate phosphatase like 1.
     
 0.803
ENSACOP00000010535
annotation not available
   
 0.773
ENSACOP00000022890
annotation not available
   
 0.773
PLCE1
Phospholipase C epsilon 1.
    
 0.748
PLCH2
Phospholipase C eta 2.
    
 0.748
SEC61G
SEC61 translocon gamma subunit.
   
 0.742
ENSACOP00000002990
annotation not available
   
 0.733
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.