STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TFGTrafficking from ER to golgi regulator. (407 aa)    
Predicted Functional Partners:
NTRK3
Neurotrophic receptor tyrosine kinase 3.
    
 0.897
ENSACOP00000023761
annotation not available
    
 0.875
SEC31A
SEC31 homolog A, COPII coat complex component.
   
 0.866
SEC31B
SEC31 homolog B, COPII coat complex component.
   
 0.866
TPR
Translocated promoter region, nuclear basket protein.
    
  0.857
NTRK2
Neurotrophic receptor tyrosine kinase 2.
    
 0.812
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component.
   
 0.805
SEC16A
SEC16 homolog A, endoplasmic reticulum export factor.
    
 0.754
SEC16B
SEC16 homolog B, endoplasmic reticulum export factor.
    
 0.754
ENSACOP00000001586
annotation not available
    
 0.752
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.