STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTBP3Polypyrimidine tract binding protein 3. (518 aa)    
Predicted Functional Partners:
HNRNPLL
Heterogeneous nuclear ribonucleoprotein L like.
   
0.843
ENSACOP00000004537
annotation not available
   
0.843
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 0.792
HNRNPA0
Heterogeneous nuclear ribonucleoprotein A0.
   
 0.791
HNRNPA3
Heterogeneous nuclear ribonucleoprotein A3.
   
 0.791
ENSACOP00000023319
annotation not available
   
 0.752
HNRNPDL
Heterogeneous nuclear ribonucleoprotein D like.
   
 0.727
ENSACOP00000021386
annotation not available
    
 0.724
ENSACOP00000022726
annotation not available
    
 0.724
ENSACOP00000023758
annotation not available
    
 0.724
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.