STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LNX1Ligand of numb-protein X 1. (733 aa)    
Predicted Functional Partners:
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.881
ENSACOP00000023015
annotation not available
    
  0.876
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
    
0.809
ENSACOP00000007470
annotation not available
   
  0.803
MPP7
Membrane palmitoylated protein 7.
    
 0.785
MPP5
Membrane palmitoylated protein 5.
    
 0.785
ENSACOP00000024951
annotation not available
    
 0.785
IFT57
Intraflagellar transport 57.
    
 0.758
IFT172
Intraflagellar transport 172.
    
 0.751
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.749
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.