STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC19Tetratricopeptide repeat domain 19. (487 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.967
SGK3
Serum/glucocorticoid regulated kinase family member 3.
    
  0.869
GLYR1
Glyoxylate reductase 1 homolog.
    
 0.785
LYPD6B
LY6/PLAUR domain containing 6B.
   
 0.771
LYPD6
LY6/PLAUR domain containing 6.
   
 0.771
KIF5B
Kinesin family member 5B.
   
 0.771
KIF5C
Kinesin family member 5C.
   
 0.771
HAS2
Hyaluronan synthase 2.
  
 0.757
HAS3
Hyaluronan synthase 3.
  
 0.757
CDC16
Cell division cycle 16.
    
 0.755
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.