STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D4TBC1 domain family member 4. (1293 aa)    
Predicted Functional Partners:
RAB14
RAB14, member RAS oncogene family.
    
 0.828
RAB2A
RAB2A, member RAS oncogene family.
    
 0.800
PRKAA1
Protein kinase AMP-activated catalytic subunit alpha 1.
     
 0.749
PRKAA2
Protein kinase AMP-activated catalytic subunit alpha 2.
     
 0.744
PRKAB1
Protein kinase AMP-activated non-catalytic subunit beta 1.
     
 0.741
PRKAB2
Protein kinase AMP-activated non-catalytic subunit beta 2.
     
 0.736
RAB11A
RAB11A, member RAS oncogene family.
    
 0.715
ENSACOP00000023549
annotation not available
    
 0.715
ENSACOP00000024818
annotation not available
    
 0.715
DNAJC27
DnaJ heat shock protein family (Hsp40) member C27.
    
 0.659
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.