STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR61WD repeat domain 61. (460 aa)    
Predicted Functional Partners:
TTC37
Tetratricopeptide repeat domain 37.
    
 0.999
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.999
RTF1
RTF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.994
ENSACOP00000006505
annotation not available
    
 0.990
ENSACOP00000008008
annotation not available
    
 0.990
ENSACOP00000011974
annotation not available
    
 0.989
ENSACOP00000012289
annotation not available
    
 0.989
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
   
 0.979
SUPT4H1
SPT4 homolog, DSIF elongation factor subunit.
   
 0.978
SUPT6H
SPT6 homolog, histone chaperone and transcription elongation factor.
    
 0.975
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.