STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGFOD22-oxoglutarate and iron dependent oxygenase domain containing 2. (401 aa)    
Predicted Functional Partners:
ENSACOP00000024434
annotation not available
    
 0.723
SETD1B
SET domain containing 1B, histone lysine methyltransferase.
    
  0.711
SETDB1
SET domain bifurcated histone lysine methyltransferase 1.
    
  0.617
SETDB2
SET domain bifurcated histone lysine methyltransferase 2.
    
  0.617
ENSACOP00000024840
annotation not available
    
 0.604
SUV39H2
Suppressor of variegation 3-9 homolog 2.
    
  0.593
EHMT1
Euchromatic histone lysine methyltransferase 1.
    
  0.593
MOSMO
Modulator of smoothened.
   
 0.582
ENSACOP00000005313
annotation not available
   
 0.582
ENSACOP00000005992
annotation not available
   
 0.582
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.