STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPIL4Peptidylprolyl isomerase like 4. (483 aa)    
Predicted Functional Partners:
SYF2
SYF2 pre-mRNA splicing factor.
    
 0.919
PPWD1
Peptidylprolyl isomerase domain and WD repeat containing 1.
  
0.886
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.884
CDC40
Cell division cycle 40.
   
 0.858
SF3A1
Splicing factor 3a subunit 1.
   
 0.844
WDR25
WD repeat domain 25.
    
 0.828
BUD13
BUD13 homolog.
    
 0.817
NUP155
Nucleoporin 155.
   
 0.806
SNW1
SNW domain containing 1.
   
 0.803
NSRP1
Nuclear speckle splicing regulatory protein 1.
    
 0.803
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.