STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C12orf10Chromosome 12 open reading frame 10. (407 aa)    
Predicted Functional Partners:
NDUFS8
NADH:ubiquinone oxidoreductase core subunit S8.
   
    0.768
NDUFS1
NADH:ubiquinone oxidoreductase core subunit S1.
  
    0.756
ENSACOP00000008718
annotation not available
   
    0.748
SDHC
Succinate dehydrogenase complex subunit C.
   
    0.744
ENSACOP00000012219
annotation not available
   
    0.679
ENSACOP00000012874
annotation not available
   
    0.679
MRTO4
MRT4 homolog, ribosome maturation factor.
  
    0.596
NIP7
Nucleolar pre-rRNA processing protein NIP7.
   
    0.557
PFDN5
Prefoldin subunit 5.
     
 0.551
ENSACOP00000000325
annotation not available
  
 
 0.550
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.