STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSDC1BSD domain containing 1. (422 aa)    
Predicted Functional Partners:
GHITM
Growth hormone inducible transmembrane protein.
   
    0.713
ARL2BP
ADP ribosylation factor like GTPase 2 binding protein.
      
 0.501
HSDL2
Hydroxysteroid dehydrogenase like 2.
    
 
 0.480
ENSACOP00000012998
annotation not available
      
 0.439
HPSE
Heparanase.
      
 0.422
POLR3D
RNA polymerase III subunit D.
      
 0.418
EXOC7
Exocyst complex component 7.
      
 0.414
PNPO
Pyridoxamine 5'-phosphate oxidase.
      
 0.410
HTATIP2
HIV-1 Tat interactive protein 2.
   
  
 0.410
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.