STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACOP00000024928annotation not available (243 aa)    
Predicted Functional Partners:
SMC1B
Structural maintenance of chromosomes 1B.
   
 0.930
SMC3
Structural maintenance of chromosomes 3.
   
 0.917
PDS5B
PDS5 cohesin associated factor B.
   
 0.870
PDS5A
PDS5 cohesin associated factor A.
   
 0.855
RAD21
RAD21 cohesin complex component.
   
 0.854
ENSACOP00000009694
annotation not available
   
 0.854
SMC6
Structural maintenance of chromosomes 6.
   
 0.834
WAPL
WAPL cohesin release factor.
   
 0.834
ENSACOP00000016059
annotation not available
   
 0.834
NIPBL
NIPBL cohesin loading factor.
   
 0.834
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.