STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMO3LIM domain only 3. (156 aa)    
Predicted Functional Partners:
LDB2
LIM domain binding 2.
    
 0.890
LDB1
LIM domain binding 1.
    
 0.890
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
    
 0.780
GATA3
GATA binding protein 3.
    
 0.661
GATA2
GATA binding protein 2.
    
 0.658
TCF3
Transcription factor 3.
    
 0.641
ENSACOP00000020427
annotation not available
    
 0.641
TCF12
Transcription factor 12.
    
 0.641
GATA6
GATA binding protein 6.
    
 0.629
GATA5
GATA binding protein 5.
    
 0.626
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.