STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRIM1Cysteine rich transmembrane BMP regulator 1. (1044 aa)    
Predicted Functional Partners:
ENSACOP00000024772
annotation not available
    
 0.841
FREM1
FRAS1 related extracellular matrix 1.
    
 0.802
ENSACOP00000001885
annotation not available
    
0.772
GLE1
GLE1 RNA export mediator.
    
 0.744
NUP214
Nucleoporin 214.
    
 0.716
RPS15
Ribosomal protein S15.
   
  0.710
RPS28
Ribosomal protein S28.
   
  0.708
AAAS
Aladin WD repeat nucleoporin.
    
 0.702
RPS11
Ribosomal protein S11.
   
 0.699
ENSACOP00000019439
annotation not available
   
 0.698
Your Current Organism:
Amazona collaria
NCBI taxonomy Id: 241587
Other names: A. collaria, yellow-billed parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.