STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGO_1908Twitching motility protein PilT. (347 aa)    
Predicted Functional Partners:
NGO_1669
Type II secretion system protein F.
 
  
 0.859
NGO_1670
Methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
   
 0.855
pilQ
Pilus assembly protein PilQ; Required for type IV pilus biogenesis and competence. Could function as a pore for exit of the pilus but also as a channel for entry of heme and antimicrobial agents and uptake of transforming DNA. Belongs to the bacterial secretin family. PilQ subfamily.
 
   
 0.852
NGO_0098
Pilus assembly protein PilM.
 
   
 0.656
NGO_0276
Competence protein ComA.
     
 0.630
NGO_1907
Alanine racemase; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
       0.614
NGO_1909
Twitching motility protein PilT.
 
   
0.598
NGO_1673
Pilus assembly protein PilF.
 
  
0.562
NGO_0096
Pilus assembly protein PilO.
 
  
 0.539
NGO_1906
RNA-binding protein.
       0.537
Your Current Organism:
Neisseria gonorrhoeae
NCBI taxonomy Id: 242231
Other names: N. gonorrhoeae FA 1090, Neisseria gonorrhoeae FA 1090
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