node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMW31964.1 | AMW32450.1 | NA23_00460 | NA23_03510 | 50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S30; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.874 |
AMW31964.1 | rplE | NA23_00460 | NA23_07065 | 50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.980 |
AMW31964.1 | rplI | NA23_00460 | NA23_07220 | 50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L9; Binds to the 23S rRNA. | 0.984 |
AMW31964.1 | rplO | NA23_00460 | NA23_07030 | 50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.981 |
AMW31964.1 | rpmC | NA23_00460 | NA23_07085 | 50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL29 family. | 0.958 |
AMW31964.1 | rpmH | NA23_00460 | NA23_06220 | 50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L34; In Escherichia coli transcription of this gene is enhanced by polyamines; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL34 family. | 0.964 |
AMW31964.1 | rpsD | NA23_00460 | NA23_06990 | 50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.993 |
AMW31964.1 | rpsE | NA23_00460 | NA23_07040 | 50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.973 |
AMW31964.1 | rpsI | NA23_00460 | NA23_00475 | 50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family. | 0.996 |
AMW31964.1 | rpsP | NA23_00460 | NA23_04525 | 50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family. | 0.995 |
AMW32450.1 | AMW31964.1 | NA23_03510 | NA23_00460 | 30S ribosomal protein S30; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.874 |
AMW32450.1 | rplE | NA23_03510 | NA23_07065 | 30S ribosomal protein S30; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.871 |
AMW32450.1 | rplI | NA23_03510 | NA23_07220 | 30S ribosomal protein S30; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L9; Binds to the 23S rRNA. | 0.869 |
AMW32450.1 | rplO | NA23_03510 | NA23_07030 | 30S ribosomal protein S30; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.866 |
AMW32450.1 | rpmC | NA23_03510 | NA23_07085 | 30S ribosomal protein S30; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL29 family. | 0.864 |
AMW32450.1 | rpmH | NA23_03510 | NA23_06220 | 30S ribosomal protein S30; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L34; In Escherichia coli transcription of this gene is enhanced by polyamines; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL34 family. | 0.870 |
AMW32450.1 | rpsD | NA23_03510 | NA23_06990 | 30S ribosomal protein S30; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.868 |
AMW32450.1 | rpsE | NA23_03510 | NA23_07040 | 30S ribosomal protein S30; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.866 |
AMW32450.1 | rpsI | NA23_03510 | NA23_00475 | 30S ribosomal protein S30; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family. | 0.874 |
AMW32450.1 | rpsP | NA23_03510 | NA23_04525 | 30S ribosomal protein S30; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family. | 0.864 |