STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMW32635.1Peptidase M29; Derived by automated computational analysis using gene prediction method: Protein Homology. (398 aa)    
Predicted Functional Partners:
AMW32636.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.675
AMW32637.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.675
AMW32633.1
Competence protein ComEC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.593
AMW32439.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.548
apgM
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.531
AMW32638.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.518
AMW32581.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.515
AMW33255.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.515
AMW33290.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.515
AMW33451.1
Peptidase M3; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.464
Your Current Organism:
Fervidobacterium islandicum
NCBI taxonomy Id: 2423
Other names: ATCC 49647, DSM 5733, F. islandicum, Fervidibacterium islandicum, strain H-21, strain H21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.