STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMW32705.1Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)    
Predicted Functional Partners:
NA23_05045
FAD-binding protein; ABC transporter substrate-binding protein; disrupted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.996
AMW32255.1
Glycerol-3-phosphate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
 0.938
AMW32287.1
Glycerol-3-phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.901
AMW33775.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.899
AMW33633.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.895
AMW32891.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.895
AMW32417.1
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.892
AMW32874.1
Lactose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.887
AMW32288.1
Glycerol-3-phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.859
AMW32280.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.855
Your Current Organism:
Fervidobacterium islandicum
NCBI taxonomy Id: 2423
Other names: ATCC 49647, DSM 5733, F. islandicum, Fervidibacterium islandicum, strain H-21, strain H21
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