STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMW33080.1Metal-dependent phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (498 aa)    
Predicted Functional Partners:
coaX
Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
       0.703
AMW33082.1
Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.703
AMW33761.1
Peptidase M50; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.608
AMW33083.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.570
whiA
DNA-binding protein WhiA; Involved in cell division and chromosome segregation.
 
     0.560
AMW32728.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.513
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
       0.501
AMW33086.1
RNase adaptor protein RapZ; Displays ATPase and GTPase activities.
       0.501
AMW33087.1
Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
       0.501
AMW33084.1
Cell division protein ZapA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.500
Your Current Organism:
Fervidobacterium islandicum
NCBI taxonomy Id: 2423
Other names: ATCC 49647, DSM 5733, F. islandicum, Fervidibacterium islandicum, strain H-21, strain H21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.