STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGG_11862ABC transporter ATP-binding protein ARB1. (636 aa)    
Predicted Functional Partners:
MGG_11382
Translation initiation factor RLI1.
   
 
 0.931
MGG_06066
Eukaryotic translation initiation factor 5B.
  
 
 0.771
MGG_02572
Prion formation protein 1.
   
 
0.764
MGG_14971
Elongation factor 3.
   
 
0.702
MGG_01158
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.691
MGG_10185
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.681
MGG_04008
60S ribosomal protein L4.
   
 
 0.675
TIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family.
   
 
 0.672
MGG_04444
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
    
 
 0.665
MGG_05449
60S ribosomal protein L16.
  
   0.636
Your Current Organism:
Pyricularia oryzae
NCBI taxonomy Id: 242507
Other names: Magnaporthe grisea 70-15, P. oryzae 70-15, Pyricularia oryzae 70-15
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