MGG_05568 protein (Pyricularia oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MGG_05568

Uncharacterized protein. (238 aa)

Predicted Functional Partners:

MGG_07091

0.938

MGG_03568

0.928

MGG_04228

0.855

MGG_08885

0.842

MGG_00406

0.835

MGG_03214

0.799

MGG_04219

0.786

MGG_10159

0.751

MGG_11419

0.751

MGG_01471

0.750

Your Current Organism:

Pyricularia oryzae

NCBI taxonomy Id: 242507
Other names: Magnaporthe grisea 70-15, P. oryzae 70-15, Pyricularia oryzae 70-15

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MGG_00406	MGG_01471	G4NCD7	G4MSK6	Mitochondrial import inner membrane translocase subunit tim-16.	Import inner membrane translocase subunit tim-21.	0.834
MGG_00406	MGG_03214	G4NCD7	G4N9Z4	Mitochondrial import inner membrane translocase subunit tim-16.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.909
MGG_00406	MGG_04219	G4NCD7	G4NF81	Mitochondrial import inner membrane translocase subunit tim-16.	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.905
MGG_00406	MGG_04228	G4NCD7	G4NFC4	Mitochondrial import inner membrane translocase subunit tim-16.	Mitochondrial import inner membrane translocase subunit tim-17.	0.959
MGG_00406	MGG_05568	G4NCD7	G4MMQ9	Mitochondrial import inner membrane translocase subunit tim-16.	Uncharacterized protein.	0.835
MGG_00406	MGG_08885	G4NCD7	G4MVJ5	Mitochondrial import inner membrane translocase subunit tim-16.	Mitochondrial import inner membrane translocase subunit tim23.	0.968
MGG_00406	MGG_10159	G4NCD7	G4MUL8	Mitochondrial import inner membrane translocase subunit tim-16.	Mitochondrial import inner membrane translocase subunit tim-14.	0.992
MGG_00406	MGG_11419	G4NCD7	G4MYI5	Mitochondrial import inner membrane translocase subunit tim-16.	Mitochondrial inner membrane translocase subunit TIM44.	0.970
MGG_01471	MGG_00406	G4MSK6	G4NCD7	Import inner membrane translocase subunit tim-21.	Mitochondrial import inner membrane translocase subunit tim-16.	0.834
MGG_01471	MGG_03214	G4MSK6	G4N9Z4	Import inner membrane translocase subunit tim-21.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.806
MGG_01471	MGG_04219	G4MSK6	G4NF81	Import inner membrane translocase subunit tim-21.	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.968
MGG_01471	MGG_04228	G4MSK6	G4NFC4	Import inner membrane translocase subunit tim-21.	Mitochondrial import inner membrane translocase subunit tim-17.	0.962
MGG_01471	MGG_05568	G4MSK6	G4MMQ9	Import inner membrane translocase subunit tim-21.	Uncharacterized protein.	0.750
MGG_01471	MGG_08885	G4MSK6	G4MVJ5	Import inner membrane translocase subunit tim-21.	Mitochondrial import inner membrane translocase subunit tim23.	0.984
MGG_01471	MGG_10159	G4MSK6	G4MUL8	Import inner membrane translocase subunit tim-21.	Mitochondrial import inner membrane translocase subunit tim-14.	0.781
MGG_01471	MGG_11419	G4MSK6	G4MYI5	Import inner membrane translocase subunit tim-21.	Mitochondrial inner membrane translocase subunit TIM44.	0.767
MGG_03214	MGG_00406	G4N9Z4	G4NCD7	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	Mitochondrial import inner membrane translocase subunit tim-16.	0.909
MGG_03214	MGG_01471	G4N9Z4	G4MSK6	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	Import inner membrane translocase subunit tim-21.	0.806
MGG_03214	MGG_04219	G4N9Z4	G4NF81	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.816
MGG_03214	MGG_04228	G4N9Z4	G4NFC4	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	Mitochondrial import inner membrane translocase subunit tim-17.	0.830