STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGG_09184Long-chain base protein 3. (597 aa)    
Predicted Functional Partners:
MGG_07162
Sphingosine-1-phosphate lyase.
    
 0.978
MGG_05147
Sphingoid long chain base kinase 4.
   
 0.959
MGG_06250
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
    
 0.957
MGG_16424
Uncharacterized protein.
     
 0.936
MGG_13187
Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.
     
 0.926
MGG_05189
Sphingosine N-acyltransferase lac1.
    
 0.925
MGCH7_ch7g893
TLC domain-containing protein.
    
 0.925
MGG_07051
Neutral ceramidase.
     
 0.920
MGG_11535
Neutral ceramidase.
     
 0.920
MGG_00362
3-ketodihydrosphingosine reductase tsc10.
    
 0.920
Your Current Organism:
Pyricularia oryzae
NCBI taxonomy Id: 242507
Other names: Magnaporthe grisea 70-15, P. oryzae 70-15, Pyricularia oryzae 70-15
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