STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGG_16457Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (943 aa)    
Predicted Functional Partners:
SEC13
Protein transport protein SEC13; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. It also functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport facto [...]
   
 0.999
MGG_04617
Peptidase S59 domain-containing protein.
   
 0.999
MGG_01677
Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.
   
 0.999
MGG_07338
Nuclear envelope pore membrane protein POM 121.
   
 0.999
MGG_08092
Uncharacterized protein.
  
 0.999
MGG_08911
Uncharacterized protein.
   
 0.997
MGG_08590
Nucleoporin NIC96.
   
 0.997
MGG_04528
Uncharacterized protein.
   
 0.996
MGG_01590
Nsp1_C domain-containing protein.
   
 0.993
MGG_05095
Nucleoporin Nup157/170.
   
 0.993
Your Current Organism:
Pyricularia oryzae
NCBI taxonomy Id: 242507
Other names: Magnaporthe grisea 70-15, P. oryzae 70-15, Pyricularia oryzae 70-15
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