Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MGG_02453 | MGG_04698 | G4MRW1 | G4MTC4 | rRNA processing protein Ebp2. | PQ-loop repeat-containing protein 2. | 0.463 |
MGG_02453 | MGG_08908 | G4MRW1 | G4MVM1 | rRNA processing protein Ebp2. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.990 |
MGG_04698 | MGG_02453 | G4MTC4 | G4MRW1 | PQ-loop repeat-containing protein 2. | rRNA processing protein Ebp2. | 0.463 |
MGG_04698 | MGG_07068 | G4MTC4 | G4MSM2 | PQ-loop repeat-containing protein 2. | Cystinosin. | 0.619 |
MGG_04698 | MGG_08827 | G4MTC4 | G4MUR5 | PQ-loop repeat-containing protein 2. | Aa_trans domain-containing protein. | 0.550 |
MGG_04698 | MGG_08908 | G4MTC4 | G4MVM1 | PQ-loop repeat-containing protein 2. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.436 |
MGG_07068 | MGG_04698 | G4MSM2 | G4MTC4 | Cystinosin. | PQ-loop repeat-containing protein 2. | 0.619 |
MGG_08827 | MGG_04698 | G4MUR5 | G4MTC4 | Aa_trans domain-containing protein. | PQ-loop repeat-containing protein 2. | 0.550 |
MGG_08908 | MGG_02453 | G4MVM1 | G4MRW1 | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | rRNA processing protein Ebp2. | 0.990 |
MGG_08908 | MGG_04698 | G4MVM1 | G4MTC4 | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | PQ-loop repeat-containing protein 2. | 0.436 |