STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (246 aa)    
Predicted Functional Partners:
MGG_03727
50S ribosomal protein L31e.
  
 
 0.998
MGG_07136
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 0.997
MGG_10160
Ribosome biogenesis protein RLP24.
   
 0.997
MGG_03653
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
  
 
 0.997
MGG_03135
60S ribosomal protein L30.
   
 
 0.997
MGG_03193
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 
 0.996
MGG_05237
60S ribosomal protein L7.
  
 
 0.995
MGG_03136
60S ribosomal protein L10.
   
 
 0.995
MGG_02711
Uncharacterized protein.
   
 
 0.995
MGG_03965
60S ribosomal protein L26.
  
 
 0.994
Your Current Organism:
Pyricularia oryzae
NCBI taxonomy Id: 242507
Other names: Magnaporthe grisea 70-15, P. oryzae 70-15, Pyricularia oryzae 70-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.