Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LSM1 | LSM3 | G4NAC7 | G4N3U5 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.998 |
| LSM1 | MGG_05213 | G4NAC7 | G4N542 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | YjeF_N domain-containing protein. | 0.774 |
| LSM1 | MGG_05522 | G4NAC7 | G4MM96 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Uncharacterized protein. | 0.735 |
| LSM1 | MGG_06410 | G4NAC7 | G4N7I3 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | mRNA-decapping enzyme 2. | 0.896 |
| LSM1 | MGG_07633 | G4NAC7 | G4N2Z2 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | NTP_transf_9 domain-containing protein. | 0.618 |
| LSM1 | MGG_08693 | G4NAC7 | G4NFW4 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Topoisomerase II. | 0.996 |
| LSM1 | MGG_12403 | G4NAC7 | G4MV17 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 0.980 |
| LSM1 | MGG_15042 | G4NAC7 | A0A151V4I4 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Antiviral helicase SKI2. | 0.428 |
| LSM3 | LSM1 | G4N3U5 | G4NAC7 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | 0.998 |
| LSM3 | MGG_05213 | G4N3U5 | G4N542 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | YjeF_N domain-containing protein. | 0.844 |
| LSM3 | MGG_05522 | G4N3U5 | G4MM96 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Uncharacterized protein. | 0.829 |
| LSM3 | MGG_06410 | G4N3U5 | G4N7I3 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | mRNA-decapping enzyme 2. | 0.811 |
| LSM3 | MGG_07633 | G4N3U5 | G4N2Z2 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | NTP_transf_9 domain-containing protein. | 0.786 |
| LSM3 | MGG_08693 | G4N3U5 | G4NFW4 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Topoisomerase II. | 0.999 |
| LSM3 | MGG_12403 | G4N3U5 | G4MV17 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 0.980 |
| MGG_05213 | LSM1 | G4N542 | G4NAC7 | YjeF_N domain-containing protein. | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | 0.774 |
| MGG_05213 | LSM3 | G4N542 | G4N3U5 | YjeF_N domain-containing protein. | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.844 |
| MGG_05213 | MGG_05522 | G4N542 | G4MM96 | YjeF_N domain-containing protein. | Uncharacterized protein. | 0.985 |
| MGG_05213 | MGG_06410 | G4N542 | G4N7I3 | YjeF_N domain-containing protein. | mRNA-decapping enzyme 2. | 0.998 |
| MGG_05213 | MGG_07633 | G4N542 | G4N2Z2 | YjeF_N domain-containing protein. | NTP_transf_9 domain-containing protein. | 0.897 |
page 1 of 4