STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGG_08003UbiA prenyltransferase. (373 aa)    
Predicted Functional Partners:
MGG_03902
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
     
 0.822
MGG_08844
RING-box protein 1.
     
 0.624
MGG_01282
Polyubiquitin.
     
 0.595
MGG_03163
Ubiquitin-like domain-containing protein.
     
 0.595
MGG_05477
26S protease regulatory subunit 4; Belongs to the AAA ATPase family.
   
 
  0.594
MGG_12925
26S protease regulatory subunit 6A; Belongs to the AAA ATPase family.
     
 0.594
MGCH7_ch7g327
26S proteasome regulatory subunit RPN5.
   
 
  0.593
MGG_07120
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
     
 0.522
MGG_07928
Ubiquitin-40S ribosomal protein S27a.
     
 0.499
MGG_00588
CIA30 family protein.
     
 0.499
Your Current Organism:
Pyricularia oryzae
NCBI taxonomy Id: 242507
Other names: Magnaporthe grisea 70-15, P. oryzae 70-15, Pyricularia oryzae 70-15
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