STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGG_01265BTP domain-containing protein. (222 aa)    
Predicted Functional Partners:
MGG_04720
BTP domain-containing protein.
    
 
 0.958
MGG_01266
TAFII55_N domain-containing protein.
    
 
 0.951
MGG_06742
Uncharacterized protein.
    
   0.950
MGG_15601
TATA-box-binding protein.
    
   0.950
MGG_01207
Transcription initiation factor TFIID subunit 1.
    
   0.950
MGG_09574
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
   0.950
MGG_04877
Transcription initiation factor TFIID subunit 6.
    
 
 0.950
MGG_03637
TATA-binding protein associated factor Taf2.
    
   0.950
MGG_00885
TFIID_20kDa domain-containing protein.
    
   0.950
MGG_05204
Transcription initiation factor TFIID subunit 14.
    
   0.781
Your Current Organism:
Pyricularia oryzae
NCBI taxonomy Id: 242507
Other names: Magnaporthe grisea 70-15, P. oryzae 70-15, Pyricularia oryzae 70-15
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