Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ARA1 | XYR1 | G4MNH3 | G4N708 | L-arabinose-responsive transcription regulator ARA1; Transcriptional activator of the arabinanolytic system. Involved in the regulation of extracellular arabinanolytic genes and in the regulation of the intracellular activities of L-arabinose catabolic genes in the pentose catabolic pathway (PCP) in response to the presence of L-arabinose. | NAD(P)H-dependent D-xylose reductase XYR1; Catalyzes the initial reaction in the xylose utilization pathway by reducing D-xylose into xylitol. Xylose is a major component of hemicelluloses such as xylan. Most fungi utilize D-xylose via three enzymatic reactions, xylose reductase (XR), xylitol dehydrogenase (XDH), and xylulokinase, to form xylulose 5-phosphate, which enters pentose phosphate pathway (By similarity). | 0.539 |
| ARA1 | xlr1 | G4MNH3 | G4MZJ4 | L-arabinose-responsive transcription regulator ARA1; Transcriptional activator of the arabinanolytic system. Involved in the regulation of extracellular arabinanolytic genes and in the regulation of the intracellular activities of L-arabinose catabolic genes in the pentose catabolic pathway (PCP) in response to the presence of L-arabinose. | Xylanolytic transcriptional activator xlnR homolog; Transcriptional activator of the pentose catabolic pathway (PCP). Involved in the induction of a variety of PCP enzymes during growth on D-xylose. Has no effect on cellulolytic and xylanolytic enzyme activities. | 0.532 |
| EGD1 | xlr1 | A4RC23 | G4MZJ4 | Nascent polypeptide-associated complex subunit beta; Component of the nascent polypeptide-associated complex (NAC), a dynamic component of the ribosomal exit tunnel, protecting the emerging polypeptides from interaction with other cytoplasmic proteins to ensure appropriate nascent protein targeting. The NAC complex also promotes mitochondrial protein import by enhancing productive ribosome interactions with the outer mitochondrial membrane and blocks the inappropriate interaction of ribosomes translating non-secretory nascent polypeptides with translocation sites in the membrane of the [...] | Xylanolytic transcriptional activator xlnR homolog; Transcriptional activator of the pentose catabolic pathway (PCP). Involved in the induction of a variety of PCP enzymes during growth on D-xylose. Has no effect on cellulolytic and xylanolytic enzyme activities. | 0.538 |
| MGG_11201 | aguA | G4MSK4 | G4N306 | DNA-binding protein creA. | Alpha-glucuronidase; Alpha-glucuronidase involved in the hydrolysis of xylan, a major structural heterogeneous polysaccharide found in plant biomass representing the second most abundant polysaccharide in the biosphere, after cellulose. Releases 4-O-methylglucuronic acid from xylan. Belongs to the glycosyl hydrolase 67 family. | 0.455 |
| MGG_11201 | xlr1 | G4MSK4 | G4MZJ4 | DNA-binding protein creA. | Xylanolytic transcriptional activator xlnR homolog; Transcriptional activator of the pentose catabolic pathway (PCP). Involved in the induction of a variety of PCP enzymes during growth on D-xylose. Has no effect on cellulolytic and xylanolytic enzyme activities. | 0.491 |
| MGG_12860 | xlr1 | G4N861 | G4MZJ4 | Xylulose kinase. | Xylanolytic transcriptional activator xlnR homolog; Transcriptional activator of the pentose catabolic pathway (PCP). Involved in the induction of a variety of PCP enzymes during growth on D-xylose. Has no effect on cellulolytic and xylanolytic enzyme activities. | 0.431 |
| MGG_13218 | xlr1 | G4N576 | G4MZJ4 | Pyruvate formate lyase activating enzyme. | Xylanolytic transcriptional activator xlnR homolog; Transcriptional activator of the pentose catabolic pathway (PCP). Involved in the induction of a variety of PCP enzymes during growth on D-xylose. Has no effect on cellulolytic and xylanolytic enzyme activities. | 0.469 |
| XYL1 | XYL5 | P0CT49 | G4MLU0 | Endo-1,4-beta-xylanase 1; Endo-1,4-beta-xylanase involved in the hydrolysis of xylan, a major structural heterogeneous polysaccharide found in plant biomass representing the second most abundant polysaccharide in the biosphere, after cellulose. Accounts for approximately 70 percent of the endoxylanase activity in the culture filtrate (By similarity). Belongs to the glycosyl hydrolase 11 (cellulase G) family. | Endo-1,4-beta-xylanase 5; Endo-1,4-beta-xylanase involved in the hydrolysis of xylan, a major structural heterogeneous polysaccharide found in plant biomass representing the second most abundant polysaccharide in the biosphere, after cellulose; Belongs to the glycosyl hydrolase 10 (cellulase F) family. | 0.415 |
| XYL1 | xlr1 | P0CT49 | G4MZJ4 | Endo-1,4-beta-xylanase 1; Endo-1,4-beta-xylanase involved in the hydrolysis of xylan, a major structural heterogeneous polysaccharide found in plant biomass representing the second most abundant polysaccharide in the biosphere, after cellulose. Accounts for approximately 70 percent of the endoxylanase activity in the culture filtrate (By similarity). Belongs to the glycosyl hydrolase 11 (cellulase G) family. | Xylanolytic transcriptional activator xlnR homolog; Transcriptional activator of the pentose catabolic pathway (PCP). Involved in the induction of a variety of PCP enzymes during growth on D-xylose. Has no effect on cellulolytic and xylanolytic enzyme activities. | 0.484 |
| XYL5 | XYL1 | G4MLU0 | P0CT49 | Endo-1,4-beta-xylanase 5; Endo-1,4-beta-xylanase involved in the hydrolysis of xylan, a major structural heterogeneous polysaccharide found in plant biomass representing the second most abundant polysaccharide in the biosphere, after cellulose; Belongs to the glycosyl hydrolase 10 (cellulase F) family. | Endo-1,4-beta-xylanase 1; Endo-1,4-beta-xylanase involved in the hydrolysis of xylan, a major structural heterogeneous polysaccharide found in plant biomass representing the second most abundant polysaccharide in the biosphere, after cellulose. Accounts for approximately 70 percent of the endoxylanase activity in the culture filtrate (By similarity). Belongs to the glycosyl hydrolase 11 (cellulase G) family. | 0.415 |
| XYL5 | XYR1 | G4MLU0 | G4N708 | Endo-1,4-beta-xylanase 5; Endo-1,4-beta-xylanase involved in the hydrolysis of xylan, a major structural heterogeneous polysaccharide found in plant biomass representing the second most abundant polysaccharide in the biosphere, after cellulose; Belongs to the glycosyl hydrolase 10 (cellulase F) family. | NAD(P)H-dependent D-xylose reductase XYR1; Catalyzes the initial reaction in the xylose utilization pathway by reducing D-xylose into xylitol. Xylose is a major component of hemicelluloses such as xylan. Most fungi utilize D-xylose via three enzymatic reactions, xylose reductase (XR), xylitol dehydrogenase (XDH), and xylulokinase, to form xylulose 5-phosphate, which enters pentose phosphate pathway (By similarity). | 0.493 |
| XYL5 | xlr1 | G4MLU0 | G4MZJ4 | Endo-1,4-beta-xylanase 5; Endo-1,4-beta-xylanase involved in the hydrolysis of xylan, a major structural heterogeneous polysaccharide found in plant biomass representing the second most abundant polysaccharide in the biosphere, after cellulose; Belongs to the glycosyl hydrolase 10 (cellulase F) family. | Xylanolytic transcriptional activator xlnR homolog; Transcriptional activator of the pentose catabolic pathway (PCP). Involved in the induction of a variety of PCP enzymes during growth on D-xylose. Has no effect on cellulolytic and xylanolytic enzyme activities. | 0.419 |
| XYR1 | ARA1 | G4N708 | G4MNH3 | NAD(P)H-dependent D-xylose reductase XYR1; Catalyzes the initial reaction in the xylose utilization pathway by reducing D-xylose into xylitol. Xylose is a major component of hemicelluloses such as xylan. Most fungi utilize D-xylose via three enzymatic reactions, xylose reductase (XR), xylitol dehydrogenase (XDH), and xylulokinase, to form xylulose 5-phosphate, which enters pentose phosphate pathway (By similarity). | L-arabinose-responsive transcription regulator ARA1; Transcriptional activator of the arabinanolytic system. Involved in the regulation of extracellular arabinanolytic genes and in the regulation of the intracellular activities of L-arabinose catabolic genes in the pentose catabolic pathway (PCP) in response to the presence of L-arabinose. | 0.539 |
| XYR1 | XYL5 | G4N708 | G4MLU0 | NAD(P)H-dependent D-xylose reductase XYR1; Catalyzes the initial reaction in the xylose utilization pathway by reducing D-xylose into xylitol. Xylose is a major component of hemicelluloses such as xylan. Most fungi utilize D-xylose via three enzymatic reactions, xylose reductase (XR), xylitol dehydrogenase (XDH), and xylulokinase, to form xylulose 5-phosphate, which enters pentose phosphate pathway (By similarity). | Endo-1,4-beta-xylanase 5; Endo-1,4-beta-xylanase involved in the hydrolysis of xylan, a major structural heterogeneous polysaccharide found in plant biomass representing the second most abundant polysaccharide in the biosphere, after cellulose; Belongs to the glycosyl hydrolase 10 (cellulase F) family. | 0.493 |
| XYR1 | xlr1 | G4N708 | G4MZJ4 | NAD(P)H-dependent D-xylose reductase XYR1; Catalyzes the initial reaction in the xylose utilization pathway by reducing D-xylose into xylitol. Xylose is a major component of hemicelluloses such as xylan. Most fungi utilize D-xylose via three enzymatic reactions, xylose reductase (XR), xylitol dehydrogenase (XDH), and xylulokinase, to form xylulose 5-phosphate, which enters pentose phosphate pathway (By similarity). | Xylanolytic transcriptional activator xlnR homolog; Transcriptional activator of the pentose catabolic pathway (PCP). Involved in the induction of a variety of PCP enzymes during growth on D-xylose. Has no effect on cellulolytic and xylanolytic enzyme activities. | 0.588 |
| aguA | MGG_11201 | G4N306 | G4MSK4 | Alpha-glucuronidase; Alpha-glucuronidase involved in the hydrolysis of xylan, a major structural heterogeneous polysaccharide found in plant biomass representing the second most abundant polysaccharide in the biosphere, after cellulose. Releases 4-O-methylglucuronic acid from xylan. Belongs to the glycosyl hydrolase 67 family. | DNA-binding protein creA. | 0.455 |
| aguA | xlr1 | G4N306 | G4MZJ4 | Alpha-glucuronidase; Alpha-glucuronidase involved in the hydrolysis of xylan, a major structural heterogeneous polysaccharide found in plant biomass representing the second most abundant polysaccharide in the biosphere, after cellulose. Releases 4-O-methylglucuronic acid from xylan. Belongs to the glycosyl hydrolase 67 family. | Xylanolytic transcriptional activator xlnR homolog; Transcriptional activator of the pentose catabolic pathway (PCP). Involved in the induction of a variety of PCP enzymes during growth on D-xylose. Has no effect on cellulolytic and xylanolytic enzyme activities. | 0.564 |
| xlr1 | ARA1 | G4MZJ4 | G4MNH3 | Xylanolytic transcriptional activator xlnR homolog; Transcriptional activator of the pentose catabolic pathway (PCP). Involved in the induction of a variety of PCP enzymes during growth on D-xylose. Has no effect on cellulolytic and xylanolytic enzyme activities. | L-arabinose-responsive transcription regulator ARA1; Transcriptional activator of the arabinanolytic system. Involved in the regulation of extracellular arabinanolytic genes and in the regulation of the intracellular activities of L-arabinose catabolic genes in the pentose catabolic pathway (PCP) in response to the presence of L-arabinose. | 0.532 |
| xlr1 | EGD1 | G4MZJ4 | A4RC23 | Xylanolytic transcriptional activator xlnR homolog; Transcriptional activator of the pentose catabolic pathway (PCP). Involved in the induction of a variety of PCP enzymes during growth on D-xylose. Has no effect on cellulolytic and xylanolytic enzyme activities. | Nascent polypeptide-associated complex subunit beta; Component of the nascent polypeptide-associated complex (NAC), a dynamic component of the ribosomal exit tunnel, protecting the emerging polypeptides from interaction with other cytoplasmic proteins to ensure appropriate nascent protein targeting. The NAC complex also promotes mitochondrial protein import by enhancing productive ribosome interactions with the outer mitochondrial membrane and blocks the inappropriate interaction of ribosomes translating non-secretory nascent polypeptides with translocation sites in the membrane of the [...] | 0.538 |
| xlr1 | MGG_11201 | G4MZJ4 | G4MSK4 | Xylanolytic transcriptional activator xlnR homolog; Transcriptional activator of the pentose catabolic pathway (PCP). Involved in the induction of a variety of PCP enzymes during growth on D-xylose. Has no effect on cellulolytic and xylanolytic enzyme activities. | DNA-binding protein creA. | 0.491 |
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