STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGG_06218RNA-binding post-transcriptional regulator cip2. (639 aa)    
Predicted Functional Partners:
MGG_03265
mRNA 3'-end-processing protein RNA-14.
   
 0.914
MGG_14293
Fip1 domain-containing protein.
    
 0.912
MGG_01804
Endoribonuclease YSH1.
   
 0.910
MGG_10820
DUF3453 domain-containing protein.
   
 0.908
MGG_06570
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.898
MGG_00739
Cft-1.
   
 0.895
MGG_04621
YTH domain-containing protein.
    
 0.886
MGG_05325
Polyadenylation factor subunit 2.
    
 0.861
MGG_08573
CID domain-containing protein.
    
 0.857
CLP1
mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.
   
 0.820
Your Current Organism:
Pyricularia oryzae
NCBI taxonomy Id: 242507
Other names: Magnaporthe grisea 70-15, P. oryzae 70-15, Pyricularia oryzae 70-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.