Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MGG_01362 | MGG_02016 | G4MZ20 | G4MMS0 | CMGC/CDK/CDC2 protein kinase; Belongs to the protein kinase superfamily. | Serine/threonine protein kinase. | 0.671 |
MGG_01362 | MGG_04771 | G4MZ20 | G4MTS7 | CMGC/CDK/CDC2 protein kinase; Belongs to the protein kinase superfamily. | Cytoplasmic dynein 1 intermediate chain 2. | 0.597 |
MGG_01362 | MGG_06111 | G4MZ20 | G4N5H8 | CMGC/CDK/CDC2 protein kinase; Belongs to the protein kinase superfamily. | Mitotic checkpoint protein BUB3. | 0.783 |
MGG_01362 | MGG_07611 | G4MZ20 | G4N2L6 | CMGC/CDK/CDC2 protein kinase; Belongs to the protein kinase superfamily. | NUDE_C domain-containing protein. | 0.636 |
MGG_01362 | MGG_08269 | G4MZ20 | G4MXB1 | CMGC/CDK/CDC2 protein kinase; Belongs to the protein kinase superfamily. | Mitotic spindle checkpoint component mad2. | 0.844 |
MGG_01362 | MGG_09960 | G4MZ20 | G4MRN5 | CMGC/CDK/CDC2 protein kinase; Belongs to the protein kinase superfamily. | Serine/threonine-protein kinase. | 0.888 |
MGG_01362 | MGG_11205 | G4MZ20 | G4MSJ0 | CMGC/CDK/CDC2 protein kinase; Belongs to the protein kinase superfamily. | Dynein heavy chain. | 0.744 |
MGG_01362 | PAC1 | G4MZ20 | A4R3M4 | CMGC/CDK/CDC2 protein kinase; Belongs to the protein kinase superfamily. | Nuclear distribution protein PAC1; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs; Belongs to the WD repeat LIS1/nudF family. | 0.643 |
MGG_02016 | MGG_01362 | G4MMS0 | G4MZ20 | Serine/threonine protein kinase. | CMGC/CDK/CDC2 protein kinase; Belongs to the protein kinase superfamily. | 0.671 |
MGG_02016 | MGG_03604 | G4MMS0 | G4N7C2 | Serine/threonine protein kinase. | Nuclear movement protein nudC. | 0.650 |
MGG_02016 | MGG_04660 | G4MMS0 | G4MTA2 | Serine/threonine protein kinase. | CMGC/CDK/CDK5 protein kinase; Belongs to the protein kinase superfamily. | 0.679 |
MGG_02016 | MGG_04771 | G4MMS0 | G4MTS7 | Serine/threonine protein kinase. | Cytoplasmic dynein 1 intermediate chain 2. | 0.599 |
MGG_02016 | MGG_06111 | G4MMS0 | G4N5H8 | Serine/threonine protein kinase. | Mitotic checkpoint protein BUB3. | 0.633 |
MGG_02016 | MGG_07611 | G4MMS0 | G4N2L6 | Serine/threonine protein kinase. | NUDE_C domain-containing protein. | 0.596 |
MGG_02016 | MGG_08269 | G4MMS0 | G4MXB1 | Serine/threonine protein kinase. | Mitotic spindle checkpoint component mad2. | 0.765 |
MGG_02016 | MGG_11205 | G4MMS0 | G4MSJ0 | Serine/threonine protein kinase. | Dynein heavy chain. | 0.640 |
MGG_02016 | PAC1 | G4MMS0 | A4R3M4 | Serine/threonine protein kinase. | Nuclear distribution protein PAC1; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs; Belongs to the WD repeat LIS1/nudF family. | 0.610 |
MGG_03604 | MGG_02016 | G4N7C2 | G4MMS0 | Nuclear movement protein nudC. | Serine/threonine protein kinase. | 0.650 |
MGG_03604 | MGG_04771 | G4N7C2 | G4MTS7 | Nuclear movement protein nudC. | Cytoplasmic dynein 1 intermediate chain 2. | 0.647 |
MGG_03604 | MGG_06111 | G4N7C2 | G4N5H8 | Nuclear movement protein nudC. | Mitotic checkpoint protein BUB3. | 0.605 |
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