STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGG_05948Zinc knuckle domain-containing protein. (199 aa)    
Predicted Functional Partners:
MGG_03931
FRQ-interacting RNA helicase.
   
 
 0.608
MGG_00073
DNA polymerase sigma.
   
 
 0.575
MGG_04502
Ribosomal RNA methyltransferase MRM2.
   
 
 0.544
MGG_06690
General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.
 
  
   0.501
MGG_05264
Translation initiation factor 4B.
   
 
 0.484
MGG_03188
Cytochrome c oxidase polypeptide 5.
 
  
   0.448
MGG_05673
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.441
MGG_01059
26S proteasome regulatory subunit rpn-8.
 
 
   0.414
MGG_11889
T-complex protein 1 subunit epsilon.
   
 
 0.413
MGG_06915
Uracil phosphoribosyltransferase.
 
    
 0.410
Your Current Organism:
Pyricularia oryzae
NCBI taxonomy Id: 242507
Other names: Magnaporthe grisea 70-15, P. oryzae 70-15, Pyricularia oryzae 70-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.