Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MGG_04467 | MGG_05248 | G4MKJ9 | G4N5E1 | 60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. | 60S ribosomal protein L32. | 0.999 |
MGG_04467 | MGG_05449 | G4MKJ9 | G4MLS0 | 60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. | 60S ribosomal protein L16. | 0.999 |
MGG_04467 | MGG_06657 | G4MKJ9 | G4MKR2 | 60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. | 40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. | 0.999 |
MGG_04467 | MGG_06658 | G4MKJ9 | G4MKR3 | 60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. | 40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. | 0.999 |
MGG_04467 | MGG_06693 | G4MKJ9 | G4ML54 | 60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. | 60S ribosomal protein L27-A. | 0.999 |
MGG_04467 | MGG_06721 | G4MKJ9 | G4ML84 | 60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. | 60S ribosomal protein L28; Belongs to the universal ribosomal protein uL15 family. | 0.999 |
MGG_04467 | MGG_06952 | G4MKJ9 | G4MNH0 | 60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. | Ribosomal protein L38e; Belongs to the eukaryotic ribosomal protein eL38 family. | 0.999 |
MGG_04467 | MGG_13645 | G4MKJ9 | A4R6R9 | 60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. | 60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. | 0.999 |
MGG_04467 | RPS0 | G4MKJ9 | A4R188 | 60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. | 40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. | 0.999 |
MGG_04467 | RPS1 | G4MKJ9 | D4NXE7 | 60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. | 40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.999 |
MGG_05248 | MGG_04467 | G4N5E1 | G4MKJ9 | 60S ribosomal protein L32. | 60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. | 0.999 |
MGG_05248 | MGG_05449 | G4N5E1 | G4MLS0 | 60S ribosomal protein L32. | 60S ribosomal protein L16. | 0.999 |
MGG_05248 | MGG_06657 | G4N5E1 | G4MKR2 | 60S ribosomal protein L32. | 40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. | 0.999 |
MGG_05248 | MGG_06658 | G4N5E1 | G4MKR3 | 60S ribosomal protein L32. | 40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. | 0.999 |
MGG_05248 | MGG_06693 | G4N5E1 | G4ML54 | 60S ribosomal protein L32. | 60S ribosomal protein L27-A. | 0.999 |
MGG_05248 | MGG_06721 | G4N5E1 | G4ML84 | 60S ribosomal protein L32. | 60S ribosomal protein L28; Belongs to the universal ribosomal protein uL15 family. | 0.999 |
MGG_05248 | MGG_06952 | G4N5E1 | G4MNH0 | 60S ribosomal protein L32. | Ribosomal protein L38e; Belongs to the eukaryotic ribosomal protein eL38 family. | 0.999 |
MGG_05248 | MGG_13645 | G4N5E1 | A4R6R9 | 60S ribosomal protein L32. | 60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. | 0.999 |
MGG_05248 | RPS0 | G4N5E1 | A4R188 | 60S ribosomal protein L32. | 40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. | 0.999 |
MGG_05248 | RPS1 | G4N5E1 | D4NXE7 | 60S ribosomal protein L32. | 40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.999 |
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