MGG_03120 protein (Pyricularia oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MGG_03120

30S ribosomal protein S6. (128 aa)

Predicted Functional Partners:

MGG_06727

0.999

MGG_06935

0.999

MGG_06995

0.999

MGG_05673

0.999

MGG_07006

0.999

MGG_09301

0.999

MGG_10651

0.999

MGG_04455

0.999

MGG_07271

0.999

MGG_10185

0.999

Your Current Organism:

Pyricularia oryzae

NCBI taxonomy Id: 242507
Other names: Magnaporthe grisea 70-15, P. oryzae 70-15, Pyricularia oryzae 70-15

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MGG_03120	MGG_04455	G4N5Y6	G4MSD2	30S ribosomal protein S6.	60S ribosomal protein L35.	0.999
MGG_03120	MGG_05673	G4N5Y6	G4MP11	30S ribosomal protein S6.	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.999
MGG_03120	MGG_06727	G4N5Y6	G4ML90	30S ribosomal protein S6.	WD domain-containing protein.	0.999
MGG_03120	MGG_06935	G4N5Y6	G4MNE9	30S ribosomal protein S6.	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
MGG_03120	MGG_06995	G4N5Y6	G4MNY1	30S ribosomal protein S6.	37S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	0.999
MGG_03120	MGG_07006	G4N5Y6	G4MP99	30S ribosomal protein S6.	Uncharacterized protein.	0.999
MGG_03120	MGG_07271	G4N5Y6	G4MUJ6	30S ribosomal protein S6.	Mitochondrial ribosomal small subunit component.	0.999
MGG_03120	MGG_09301	G4N5Y6	G4MQQ1	30S ribosomal protein S6.	Uncharacterized protein.	0.999
MGG_03120	MGG_10185	G4N5Y6	G4MUN3	30S ribosomal protein S6.	60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.	0.999
MGG_03120	MGG_10651	G4N5Y6	G4MRP5	30S ribosomal protein S6.	50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.	0.999
MGG_04455	MGG_03120	G4MSD2	G4N5Y6	60S ribosomal protein L35.	30S ribosomal protein S6.	0.999
MGG_04455	MGG_05673	G4MSD2	G4MP11	60S ribosomal protein L35.	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.999
MGG_04455	MGG_06727	G4MSD2	G4ML90	60S ribosomal protein L35.	WD domain-containing protein.	0.999
MGG_04455	MGG_06935	G4MSD2	G4MNE9	60S ribosomal protein L35.	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
MGG_04455	MGG_06995	G4MSD2	G4MNY1	60S ribosomal protein L35.	37S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	0.979
MGG_04455	MGG_07006	G4MSD2	G4MP99	60S ribosomal protein L35.	Uncharacterized protein.	0.977
MGG_04455	MGG_10185	G4MSD2	G4MUN3	60S ribosomal protein L35.	60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.	0.999
MGG_04455	MGG_10651	G4MSD2	G4MRP5	60S ribosomal protein L35.	50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.	0.999
MGG_05673	MGG_03120	G4MP11	G4N5Y6	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	30S ribosomal protein S6.	0.999
MGG_05673	MGG_04455	G4MP11	G4MSD2	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	60S ribosomal protein L35.	0.999