STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGG_00449Eukaryotic peptide chain release factor GTP-binding subunit. (731 aa)    
Predicted Functional Partners:
MGG_06266
Eukaryotic peptide chain release factor subunit 1.
   
 0.999
PAB1
Polyadenylate-binding protein, cytoplasmic and nuclear; Binds the poly(A) tail of mRNA. Appears to be an important mediator of the multiple roles of the poly(A) tail in mRNA biogenesis, stability and translation. In the nucleus, involved in both mRNA cleavage and polyadenylation. Is also required for efficient mRNA export to the cytoplasm. Acts in concert with a poly(A)-specific nuclease (PAN) to affect poly(A) tail shortening, which may occur concomitantly with either nucleocytoplasmic mRNA transport or translational initiation. In the cytoplasm, stimulates translation initiation and [...]
   
 0.931
MGG_06348
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
 
  
   0.903
MGG_00976
Regulator-nonsense transcripts 1.
    
 0.882
MGG_06459
Hsp98-like protein; Belongs to the ClpA/ClpB family.
    
 
 0.870
MGG_11382
Translation initiation factor RLI1.
   
 
 0.865
MGG_02572
Prion formation protein 1.
   
 
 0.846
MGG_03004
Uncharacterized protein.
    
 0.829
MGG_11418
Nucleic acid-binding protein.
   
 0.815
MGG_05673
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.788
Your Current Organism:
Pyricularia oryzae
NCBI taxonomy Id: 242507
Other names: Magnaporthe grisea 70-15, P. oryzae 70-15, Pyricularia oryzae 70-15
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