STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGG_01124Vesicle transport V-SNARE protein vti1. (233 aa)    
Predicted Functional Partners:
MGG_06883
t-SNARE; Belongs to the syntaxin family.
   
 0.999
MGG_08082
SNARE domain-containing protein.
    
 0.999
MGCH7_ch7g426
V-SNARE coiled-coil homology domain-containing protein.
   
 0.999
MGG_06125
SNARE Ykt6; Belongs to the synaptobrevin family.
    
 0.998
MGG_01121
Vesicular-fusion protein SEC17.
    
 0.998
MGCH7_ch7g683
Integral membrane protein sed5.
    
 0.997
MGG_06521
V-SNARE.
    
 0.995
MGG_03885
SNARE domain-containing protein; Belongs to the syntaxin family.
   
 0.992
MGG_04050
Protein transporter SEC22; Belongs to the synaptobrevin family.
   
 0.990
MGG_06325
Vacuolar membrane protein pep3.
    
 
 0.982
Your Current Organism:
Pyricularia oryzae
NCBI taxonomy Id: 242507
Other names: Magnaporthe grisea 70-15, P. oryzae 70-15, Pyricularia oryzae 70-15
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