STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGG_00976Regulator-nonsense transcripts 1. (1105 aa)    
Predicted Functional Partners:
MGG_06063
Nonsense-mediated mRNA decay factor.
   
 0.996
MGG_03912
RRM domain-containing protein.
    
 0.991
MGG_03004
Uncharacterized protein.
  
  
 
0.908
MGG_00449
Eukaryotic peptide chain release factor GTP-binding subunit.
    
 0.882
MGG_06307
Uncharacterized protein.
    
 0.867
MGG_02580
RRM domain-containing protein.
    
 0.854
MGG_03740
RNA-binding protein 8A.
    
 0.822
PAB1
Polyadenylate-binding protein, cytoplasmic and nuclear; Binds the poly(A) tail of mRNA. Appears to be an important mediator of the multiple roles of the poly(A) tail in mRNA biogenesis, stability and translation. In the nucleus, involved in both mRNA cleavage and polyadenylation. Is also required for efficient mRNA export to the cytoplasm. Acts in concert with a poly(A)-specific nuclease (PAN) to affect poly(A) tail shortening, which may occur concomitantly with either nucleocytoplasmic mRNA transport or translational initiation. In the cytoplasm, stimulates translation initiation and [...]
    
 0.812
MGG_12123
Cap binding protein.
    
 0.810
MGG_08741
tRNA selenocysteine-associated protein 1.
    
 0.792
Your Current Organism:
Pyricularia oryzae
NCBI taxonomy Id: 242507
Other names: Magnaporthe grisea 70-15, P. oryzae 70-15, Pyricularia oryzae 70-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.