Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MGG_00704 | MGG_00841 | G4NEZ2 | G4NE19 | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | Exonuclease 1. | 0.969 |
MGG_00704 | MGG_00879 | G4NEZ2 | G4NDR8 | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | DNA mismatch repair protein msh-2; Component of the post-replicative DNA mismatch repair system (MMR). | 0.999 |
MGG_00704 | MGG_02461 | G4NEZ2 | G4MRX4 | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | 3'-5' exonuclease domain-containing protein. | 0.751 |
MGG_00704 | MGG_02491 | G4NEZ2 | G4MK85 | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | DNA replication ATP-dependent helicase dna2. | 0.647 |
MGG_00704 | MGG_02656 | G4NEZ2 | G4NJG7 | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | Protein kinase rad3; Belongs to the PI3/PI4-kinase family. | 0.764 |
MGG_00704 | MGG_04466 | G4NEZ2 | G4MKK0 | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | DNA mismatch repair protein mutS. | 0.978 |
MGG_00704 | MGG_07121 | G4NEZ2 | G4MT39 | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | DNA mismatch repair protein mutL. | 0.992 |
MGG_00704 | MGG_09555 | G4NEZ2 | G4N1A8 | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.620 |
MGG_00704 | MGG_15576 | G4NEZ2 | G4MU73 | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | 0.694 |
MGG_00704 | MGG_15760 | G4NEZ2 | G4MV84 | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | Uncharacterized protein. | 0.989 |
MGG_00841 | MGG_00704 | G4NE19 | G4NEZ2 | Exonuclease 1. | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | 0.969 |
MGG_00841 | MGG_00879 | G4NE19 | G4NDR8 | Exonuclease 1. | DNA mismatch repair protein msh-2; Component of the post-replicative DNA mismatch repair system (MMR). | 0.986 |
MGG_00841 | MGG_02461 | G4NE19 | G4MRX4 | Exonuclease 1. | 3'-5' exonuclease domain-containing protein. | 0.995 |
MGG_00841 | MGG_02491 | G4NE19 | G4MK85 | Exonuclease 1. | DNA replication ATP-dependent helicase dna2. | 0.958 |
MGG_00841 | MGG_02656 | G4NE19 | G4NJG7 | Exonuclease 1. | Protein kinase rad3; Belongs to the PI3/PI4-kinase family. | 0.926 |
MGG_00841 | MGG_04466 | G4NE19 | G4MKK0 | Exonuclease 1. | DNA mismatch repair protein mutS. | 0.941 |
MGG_00841 | MGG_07121 | G4NE19 | G4MT39 | Exonuclease 1. | DNA mismatch repair protein mutL. | 0.987 |
MGG_00841 | MGG_09555 | G4NE19 | G4N1A8 | Exonuclease 1. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.982 |
MGG_00841 | MGG_15576 | G4NE19 | G4MU73 | Exonuclease 1. | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | 0.976 |
MGG_00841 | MGG_15760 | G4NE19 | G4MV84 | Exonuclease 1. | Uncharacterized protein. | 0.971 |
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