STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGG_00026Geranylgeranyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family. (405 aa)    
Predicted Functional Partners:
MGG_09239
Squalene synthase.
  
 0.660
MGG_09750
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
  
 0.640
MGG_07125
Isopentenyl-diphosphate Delta-isomerase.
  
 
 0.578
MGG_05031
Uncharacterized protein.
  
 0.551
MGG_08649
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
    
 0.545
MGG_01067
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
  
 
 0.539
MGG_01026
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
  
 
 0.477
MGG_12805
Tryptophan synthase.
     
 0.454
MGG_12110
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.432
MGG_08975
3-hydroxy-3-methylglutaryl coenzyme A reductase.
  
 
 0.420
Your Current Organism:
Pyricularia oryzae
NCBI taxonomy Id: 242507
Other names: Magnaporthe grisea 70-15, P. oryzae 70-15, Pyricularia oryzae 70-15
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