STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGG_04348Pectate lyase. (323 aa)    
Predicted Functional Partners:
MGG_07566
Amb_all domain-containing protein.
  
  
 
0.911
MGG_08938
Uncharacterized protein.
     
 0.901
MGG_05875
Pectate lyase.
     
 0.901
MGG_00618
Pectinesterase; Involved in maceration and soft-rotting of plant tissue.
   
 
 0.901
MGG_07145
Cullin-1; Belongs to the cullin family.
    
 0.623
MGG_07731
Cullin-3; Belongs to the cullin family.
    
 0.623
MGG_08844
RING-box protein 1.
    
 0.613
MGG_16784
Uncharacterized protein.
   
 0.603
MGG_04978
E3 ubiquitin ligase complex SCF subunit scon-3; Belongs to the SKP1 family.
   
 0.603
MGG_17861
Uncharacterized protein.
   
 0.603
Your Current Organism:
Pyricularia oryzae
NCBI taxonomy Id: 242507
Other names: Magnaporthe grisea 70-15, P. oryzae 70-15, Pyricularia oryzae 70-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.