STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGG_03973Splicing factor 3B subunit 4. (407 aa)    
Predicted Functional Partners:
MGG_01579
Pre-mRNA branch site protein p14.
    
 0.999
MGG_05173
Uncharacterized protein.
    
 0.999
MGG_03658
Splicing factor subunit; Belongs to the SF3B5 family.
   
 0.999
MGG_03182
Splicing factor 3B subunit 2.
   
 0.999
MGG_00356
Splicing factor 3B subunit 1.
    
 0.999
RSE1
Pre-mRNA-splicing factor RSE1; Involved in pre-mRNA splicing and cell cycle control.
   
 0.999
MGG_05375
Splicing factor 3a subunit 2.
   
 0.998
MGG_12972
Splicing factor 3a subunit 3.
    
 0.998
MGG_13209
U2 small nuclear ribonucleoprotein A.
    
 0.998
MGG_02946
Pre-mRNA-splicing factor sap114.
   
 0.998
Your Current Organism:
Pyricularia oryzae
NCBI taxonomy Id: 242507
Other names: Magnaporthe grisea 70-15, P. oryzae 70-15, Pyricularia oryzae 70-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.